BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025E03LP1|AL428390
(915 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1807 1797 0.0
>3x_Contig1807
Length = 66587
Score = 1797 bits (906), Expect = 0.0
Identities = 914/916 (99%), Gaps = 1/916 (0%)
Strand = Plus / Minus
Query: 1 cttacatttaagttccttcatttaagttctttcattttattactttcatctgtttttaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28505 cttacatttaagttccttcatttaagttctttcattttattactttcatctgtttttaat 28446
Query: 61 ctcagcttgtttaatttctatcgaaaacattttggtatctgaagaatctggagaaacttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28445 ctcagcttgtttaatttctatcgaaaacattttggtatctgaagaatctggagaaacttc 28386
Query: 121 aagattatgaagttcgaaaagtttaatagtaatgtcgaagttctttgaggccgttttgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28385 aagattatgaagttcgaaaagtttaatagtaatgtcgaagttctttgaggccgttttgat 28326
Query: 181 ttacacaattgttttggtagttactagaaagtgtaccaagtatattactcacgtgtgtat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28325 ttacacaattgttttggtagttactagaaagtgtaccaagtatattactcacgtgtgtat 28266
Query: 241 ttccgagtacaaatgatcaaagcgcas-ttaaagatccagaaacggtggtgagatacaaa 299
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 28265 ttccgagtacaaatgatcaaagcgcagcttaaagatccagaaacggtggtgagatacaaa 28206
Query: 300 aacatttctatgccttaatatttataatagaggtttgtatgcaaccgccccatatttgtt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28205 aacatttctatgccttaatatttataatagaggtttgtatgcaaccgccccatatttgtt 28146
Query: 360 tttgttggcctataatgccatggaatagcatttgcttactttaatttcatattctatatt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28145 tttgttggcctataatgccatggaatagcatttgcttactttaatttcatattctatatt 28086
Query: 420 ttgttccggatatatatatgtcttttaaagtactccaggcaaatgagttattcagtaatg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28085 ttgttccggatatatatatgtcttttaaagtactccaggcaaatgagttattcagtaatg 28026
Query: 480 gaaagattgtttttttgggacgatgggaagtcgaacatttgtcaaggagtaattaaatct 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28025 gaaagattgtttttttgggacgatgggaagtcgaacatttgtcaaggagtaattaaatct 27966
Query: 540 ttgattatacctataaagtgatataataacagcttccgctttcagctcatttgaaatagt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27965 ttgattatacctataaagtgatataataacagcttccgctttcagctcatttgaaatagt 27906
Query: 600 ataggaacctggatggttgaaaaatctttcatttcagtattttgtgagtcgtttgagggt 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27905 ataggaacctggatggttgaaaaatctttcatttcagtattttgtgagtcgtttgagggt 27846
Query: 660 atctcctgactctttcccgatagaactaattgttatctacaagttgattaatttcaatat 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27845 atctcctgactctttcccgatagaactaattgttatctacaagttgattaatttcaatat 27786
Query: 720 cgtctcaccgtttatgctcttttgcataaacttaccattcttattgttgtcgtttctaat 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27785 cgtctcaccgtttatgctcttttgcataaacttaccattcttattgttgtcgtttctaat 27726
Query: 780 gtgtgttcatcgtacttagtttttccgccaattttcattttttttcagcgttcaaactta 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27725 gtgtgttcatcgtacttagtttttccgccaattttcattttttttcagcgttcaaactta 27666
Query: 840 ctgcggatttgactggtaaatctagttcctgcatgcacatggcatgaggtctatgtaagt 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27665 ctgcggatttgactggtaaatctagttcctgcatgcacatggcatgaggtctatgtaagt 27606
Query: 900 gatgtttcaattatta 915
||||||||||||||||
Sbjct: 27605 gatgtttcaattatta 27590
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8812
Number of Sequences: 1807
Number of extensions: 8812
Number of successful extensions: 76
Number of sequences better than 1.0e-20: 1
length of query: 915
length of database: 10,358,551
effective HSP length: 16
effective length of query: 899
effective length of database: 10,329,639
effective search space: 9286345461
effective search space used: 9286345461
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)